Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918681.1_cds_XP_016468079.1_60758
CDS Infomation

[gene=LOC107790641] [db_xref=GeneID:107790641] [protein=glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like] [protein_id=XP_016468079.1] [location=complement(join(16145..16304,18025..18108,18191..18333,18463..18560,18642..18702,18794..18940,19039..19138,19228..19340,20027..20127,20381..20419,20503..20570,20734..20831,21308..21370))] [gbkey=CDS]
Sequence

ATGGCTTTCTCTTCTCTTCTCAAACCTACCGCCTCCTTTGTTCGACCTTCCCATCGTTCC
CAGACATCATGTGCAGGACTTCATCAGAGTGCTAACTCTGTCAAATTACAATCGTCCATC
TTCGGAGATGCTGTCTCAGTCATGCAATGTTCGTCCTTACAAAAATCTGGTGCCTGCAGC
ATTCAACCTGTTAGAGCAACTGCTACTGAGTTGCCTCCGACAGTTCCAAAGTCACGGACC
AGTGGGAAGACAAGGATTGGTATAAATGGTTTTGGACGGATTGGGAGATTGGTATTACGA
GTTGCAACATTCAGGGATGATATTGAAGTTGTGGCAGTTAATGACCCATTCATTGATGCA
AAGTACATGGCTTACATGTTCAAGTATGACTCCACTCACGGGGTCTACAACTCATCCATC
AGTGTCCTGGATGAGTCTACTTTGGAAATCAATGGGAAGCAGATTAAAGTCAGTAGCAAA
AGGGATCCTGCAGATATTCCATGGGGCGATTTAGGTGCAGATTATGTTGTTGAATCTTCT
GGTGTTTTCACAACCGTTGAGAAGGCCTCAGCACATAAGAAGGGTGGTGCAAAAAAGGTC
GTAATCTCAGCTCCATCAGCTGATGCACCTATGTTTGTGGTAGGAGTGAATGAGAGAACT
TACAAAACCACCATGGATGTTGTTTCTAATGCTAGCTGTACTACCAATTGCCTTGCTCCC
CTTGCCAAGGTGGTTCATGAGGAGTTTGGCATTGTTGAAGGATTAATGACAACTGTGCAT
GCAACAACAGCTACCCAAAAGACTGTTGATGGGCCATCGATGAAGGATTGGAGAGGAGGC
CGTGGTGCAGGACAAAACATCATCCCTAGTTCAACTGGTGCTGCGAAGGCAGTAGGAAAA
GTTCTGCCAGAATTGAATGGGAAGCTCACTGGAATGGCTTTCCGCGTTCCAACACCTAAT
GTCTCTGTTGTGGACTTGACTTGTCGGCTAGAGAAGAGTGCTTCTTATGATGATGTGAAA
GCAGCGATAAAGTATGCATCAGAGGGTCCACTTAAAGGCATTTTGGGTTACACAGACGAG
GATGTTGTCTCAAATGATTTTGTTGGCGATTCCAGGTCGAGCATATTTGATGCTAAAGCT
GGTATAGNCCCCTCCCCCTCCTGTCCATACCCCTATAGCACAGAACTGACTAGGTTCTAC
TGGACTTTAAACCTTTGCAGCAACCGAGTGTTGGACCTCATAGAGCACATGGCATTGGTA
GCAGCCACCAATTGA

Peptide Sequence

PEP ID

XP_016468079.1
PEP Infomation

PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like [Nicotiana tabacum]
Sequence

MAFSSLLKPTASFVRPSHRSQTSCAGLHQSANSVKLQSSIFGDAVSVMQCSSLQKSGACS
IQPVRATATELPPTVPKSRTSGKTRIGINGFGRIGRLVLRVATFRDDIEVVAVNDPFIDA
KYMAYMFKYDSTHGVYNSSISVLDESTLEINGKQIKVSSKRDPADIPWGDLGADYVVESS
GVFTTVEKASAHKKGGAKKVVISAPSADAPMFVVGVNERTYKTTMDVVSNASCTTNCLAP
LAKVVHEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAGQNIIPSSTGAAKAVGK
VLPELNGKLTGMAFRVPTPNVSVVDLTCRLEKSASYDDVKAAIKYASEGPLKGILGYTDE
DVVSNDFVGDSRSSIFDAKAGIXPSPSCPYPYSTELTRFYWTLNLCSNRVLDLIEHMALV
AATN

Transcript Sequence

Gene sequence data has not been registered.